Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ppha_1046PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: stm:STM3529 glycerol dehydrogenase. (368 aa)    
Predicted Functional Partners:
Ppha_1252
Methylglyoxal synthase-like protein; KEGG: hwa:HQ1527A methylglyoxal synthase.
  
  
 0.935
Ppha_2627
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
     
 0.924
Ppha_1047
Putative signal transduction protein with Nacht domain; PFAM: metallophosphoesterase; protein of unknown function DUF323; NACHT nucleoside triphosphatase; KEGG: cph:Cpha266_1893 protein of unknown function DUF323.
       0.541
Ppha_1044
KEGG: cph:Cpha266_1892 HAD-superfamily hydrolase, subfamily IA, variant 3.
 
   
 0.537
Ppha_1045
PFAM: Class I peptide chain release factor; KEGG: cch:Cag_1326 hypothetical protein.
       0.461
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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