STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_1046PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: stm:STM3529 glycerol dehydrogenase. (368 aa)    
Predicted Functional Partners:
Ppha_1252
Methylglyoxal synthase-like protein; KEGG: hwa:HQ1527A methylglyoxal synthase.
  
  
 0.938
Ppha_2627
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
     
 0.927
Ppha_1047
Putative signal transduction protein with Nacht domain; PFAM: metallophosphoesterase; protein of unknown function DUF323; NACHT nucleoside triphosphatase; KEGG: cph:Cpha266_1893 protein of unknown function DUF323.
       0.541
Ppha_1044
KEGG: cph:Cpha266_1892 HAD-superfamily hydrolase, subfamily IA, variant 3.
 
     0.535
Ppha_1045
PFAM: Class I peptide chain release factor; KEGG: cch:Cag_1326 hypothetical protein.
       0.461
Ppha_1273
PFAM: iron-containing alcohol dehydrogenase; KEGG: cch:Cag_0888 alcohol dehydrogenase, iron-containing.
 
  
 0.428
Ppha_1483
PFAM: iron-containing alcohol dehydrogenase; KEGG: cch:Cag_1128 alcohol dehydrogenase, iron-containing.
 
  
 0.426
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.