Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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co-expression
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[Homology]
Score
Ppha_1056KEGG: plt:Plut_0829 Legionella vir region protein. (208 aa)    
Predicted Functional Partners:
Ppha_0928
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.761
Ppha_0795
Hypothetical protein; KEGG: gbe:GbCGDNIH1_1764 general secretion pathway protein N.
  
     0.726
Ppha_0637
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_1841 TPR repeat-containing protein.
   
   0.545
Ppha_1533
PFAM: PASTA domain containing protein; KEGG: cph:Cpha266_0989 PASTA domain containing protein.
  
 
 0.532
Ppha_0385
KEGG: pvi:Cvib_0686 hypothetical protein.
  
   0.530
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.530
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
   0.511
Ppha_1694
KEGG: cte:CT0885 hypothetical protein.
    
  0.510
Ppha_1696
KEGG: cte:CT0885 hypothetical protein.
    
  0.510
Ppha_1233
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: cph:Cpha266_2260 AAA ATPase, central domain protein.
  
 
 0.458
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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