Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
Ppha_1146KEGG: cph:Cpha266_1423 hypothetical protein. (154 aa)    
Predicted Functional Partners:
Ppha_0034
KEGG: cch:Cag_1214 hypothetical protein.
  
     0.757
Ppha_1147
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cte:CT1267 amino acid efflux protein, putative.
 
     0.697
Ppha_2162
KEGG: cph:Cpha266_0858 transcriptional regulator, Fis family.
  
     0.638
Ppha_0952
PFAM: cytochrome c assembly protein; KEGG: plt:Plut_1425 HemX protein, putative.
  
     0.563
Ppha_1338
PFAM: cytoplasmic chaperone TorD family protein; KEGG: cte:CT0493 hypothetical protein.
  
     0.516
Ppha_1142
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.497
Ppha_2082
TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: cch:Cag_1370 cytochrome oxidase maturation protein cbb3-type.
  
     0.495
Ppha_1143
PFAM: conserved hypothetical protein; KEGG: pvi:Cvib_0743 conserved hypothetical protein 730; Belongs to the LOG family.
  
    0.481
Ppha_1677
PFAM: PhoU family protein; KEGG: cph:Cpha266_1043 phosphate uptake regulator, PhoU.
  
     0.476
Ppha_1144
PFAM: glycosyl transferase family 2; KEGG: cch:Cag_1106 glycosyl transferase.
       0.474
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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