STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_1147PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cte:CT1267 amino acid efflux protein, putative. (208 aa)    
Predicted Functional Partners:
Ppha_1146
KEGG: cph:Cpha266_1423 hypothetical protein.
 
     0.697
Ppha_1148
Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: cch:Cag_1081 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
       0.551
Ppha_1149
PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: cte:CT1263 hypothetical protein.
       0.547
Ppha_1143
PFAM: conserved hypothetical protein; KEGG: pvi:Cvib_0743 conserved hypothetical protein 730; Belongs to the LOG family.
 
     0.475
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.