STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_1200PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cch:Cag_1395 anti-anti-sigma factor, putative. (212 aa)    
Predicted Functional Partners:
Ppha_1516
KEGG: plt:Plut_1162 putative anti-sigma regulatory factor (serine/threonine protein kinase).
 
 
 0.892
Ppha_1021
KEGG: cph:Cpha266_1833 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; Stage II sporulation E family protein; PAS fold domain protein; SMART: PAS domain containing protein; protein phosphatase 2C domain protein.
  
 
 0.804
Ppha_1014
KEGG: cph:Cpha266_1826 putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
 
 0.784
Ppha_2548
KEGG: pvi:Cvib_0351 hypothetical protein.
 
    0.769
Ppha_2603
KEGG: cph:Cpha266_0345 hypothetical protein.
 
     0.767
Ppha_2781
KEGG: cph:Cpha266_2535 phospholipase/carboxylesterase.
  
     0.761
Ppha_0778
KEGG: pvi:Cvib_0555 hypothetical protein.
  
     0.756
Ppha_0909
KEGG: pvi:Cvib_1196 hypothetical protein.
  
     0.754
Ppha_0465
PFAM: hydroxyneurosporene synthase; KEGG: cph:Cpha266_0428 hydroxyneurosporene synthase.
  
     0.713
Ppha_0384
KEGG: cte:CT0219 glycosyl transferase.
  
     0.712
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.