Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Ppha_1326TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cph:Cpha266_1241 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (398 aa)    
Predicted Functional Partners:
Ppha_1328
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_1243 ABC transporter related.
 
  
 0.951
Ppha_1325
PFAM: regulatory protein TetR; KEGG: cph:Cpha266_1240 transcriptional regulator, TetR family.
 
   
 0.947
Ppha_1327
PFAM: protein of unknown function DUF214; KEGG: cph:Cpha266_1242 protein of unknown function DUF214.
 
     0.946
Ppha_0066
PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_0096 outer membrane efflux protein.
  
 0.725
Ppha_0381
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_1746 type I secretion outer membrane protein, TolC family.
  
 0.725
Ppha_0633
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_1845 type I secretion outer membrane protein, TolC family.
  
 0.725
Ppha_0768
PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_0620 outer membrane efflux protein.
  
 0.725
Ppha_1633
PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_1665 outer membrane efflux protein.
  
 0.725
Ppha_1884
PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_0954 outer membrane efflux protein.
  
 0.725
Ppha_2724
PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_0183 outer membrane efflux protein.
  
 0.725
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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