STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_1337PFAM: Polysulphide reductase NrfD; KEGG: pvi:Cvib_1687 polysulphide reductase, NrfD. (304 aa)    
Predicted Functional Partners:
Ppha_1335
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: cte:CT0496 polysulfide reductase, subunit A, putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.924
Ppha_1336
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cte:CT0495 polysulfide reductase, subunit B, putative.
 
  
 0.892
Ppha_1338
PFAM: cytoplasmic chaperone TorD family protein; KEGG: cte:CT0493 hypothetical protein.
 
     0.892
Ppha_0778
KEGG: pvi:Cvib_0555 hypothetical protein.
  
     0.697
Ppha_0465
PFAM: hydroxyneurosporene synthase; KEGG: cph:Cpha266_0428 hydroxyneurosporene synthase.
  
    0.695
Ppha_0909
KEGG: pvi:Cvib_1196 hypothetical protein.
  
     0.660
Ppha_1677
PFAM: PhoU family protein; KEGG: cph:Cpha266_1043 phosphate uptake regulator, PhoU.
  
     0.645
Ppha_2603
KEGG: cph:Cpha266_0345 hypothetical protein.
  
     0.638
Ppha_1517
KEGG: cph:Cpha266_1093 hypothetical protein.
  
     0.614
Ppha_0987
PFAM: DinB family protein; KEGG: cte:CT1840 hypothetical protein.
  
     0.593
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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