Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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gene co-occurrence
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Ppha_1395PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: plt:Plut_0104 hypothetical protein. (62 aa)    
Predicted Functional Partners:
Ppha_2309
PFAM: Polysulphide reductase NrfD; KEGG: cph:Cpha266_0140 polysulphide reductase, NrfD.
  
 
 0.739
Ppha_0912
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: cch:Cag_0620 twin-arginine translocation pathway signal; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.656
Ppha_1335
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: cte:CT0496 polysulfide reductase, subunit A, putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.656
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.603
Ppha_0811
KEGG: cch:Cag_1922 sulfur oxidation protein SoxX.
  
 
 0.505
Ppha_2077
PFAM: cytochrome c class I; KEGG: cch:Cag_1358 probable cb-type cytochrome c oxidase subunit III.
  
 
 0.505
Ppha_0695
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cph:Cpha266_0571 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
  
 0.481
Ppha_1394
PFAM: RNP-1 like RNA-binding protein; KEGG: cph:Cpha266_1273 RNP-1 like RNA-binding protein.
       0.447
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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