STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_1698PFAM: CHAD domain containing protein; KEGG: cte:CT0884 hypothetical protein. (523 aa)    
Predicted Functional Partners:
Ppha_1699
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pvi:Cvib_0908 cobyrinic acid a,c-diamide synthase.
 
     0.900
Ppha_2814
PFAM: Phosphoglycerate mutase; KEGG: cph:Cpha266_2579 putative phosphohistidine phosphatase, SixA.
 
     0.476
Ppha_1700
PFAM: Alkaline phosphatase; KEGG: cph:Cpha266_2693 alkaline phosphatase; Belongs to the alkaline phosphatase family.
       0.470
Ppha_1338
PFAM: cytoplasmic chaperone TorD family protein; KEGG: cte:CT0493 hypothetical protein.
  
     0.425
Ppha_1146
KEGG: cph:Cpha266_1423 hypothetical protein.
  
     0.404
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.