STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_1708PFAM: protein of unknown function DUF433; KEGG: cph:Cpha266_2222 protein of unknown function DUF433. (74 aa)    
Predicted Functional Partners:
Ppha_1709
KEGG: cph:Cpha266_2196 hypothetical protein.
 
   
 0.939
Ppha_2824
KEGG: mar:MAE_61600 predicted nucleic acid-binding protein.
  
     0.644
Ppha_0162
KEGG: cph:Cpha266_0648 hypothetical protein.
  
     0.628
Ppha_0820
KEGG: cph:Cpha266_2642 hypothetical protein.
 
   
 0.622
Ppha_1710
KEGG: cph:Cpha266_1183 hypothetical protein.
       0.532
Ppha_1707
KEGG: cph:Cpha266_1183 hypothetical protein.
       0.490
Ppha_0094
KEGG: syn:sll1715 hypothetical protein.
  
     0.465
Ppha_2650
KEGG: syn:sll1715 hypothetical protein.
  
     0.431
Ppha_1740
KEGG: amr:AM1_1925 hypothetical protein.
  
     0.409
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.