STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_1715PFAM: protein of unknown function DUF497; KEGG: rrs:RoseRS_0832 protein of unknown function DUF497. (93 aa)    
Predicted Functional Partners:
Ppha_1714
KEGG: gur:Gura_2218 hypothetical protein.
 
     0.916
Ppha_2271
KEGG: dol:Dole_0659 hypothetical protein.
 
 
 0.823
Ppha_0915
KEGG: cph:Cpha266_2182 hypothetical protein.
 
     0.750
Ppha_2410
KEGG: rpe:RPE_1775 hypothetical protein.
 
     0.680
Ppha_1716
KEGG: cph:Cpha266_0070 helix-turn-helix protein, CopG family.
 
    0.630
Ppha_2520
KEGG: gur:Gura_1489 hypothetical protein.
 
 
 0.466
Ppha_1740
KEGG: amr:AM1_1925 hypothetical protein.
  
     0.449
Ppha_0094
KEGG: syn:sll1715 hypothetical protein.
  
     0.447
Ppha_2141
KEGG: cph:Cpha266_2116 hypothetical protein.
  
     0.412
Ppha_1717
PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA4135 GCN5-related N-acetyltransferase.
       0.400
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.