STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_1739KEGG: mlo:mlr2530 hypothetical protein. (66 aa)    
Predicted Functional Partners:
Ppha_1740
KEGG: amr:AM1_1925 hypothetical protein.
 
     0.929
Ppha_1742
KEGG: cyb:CYB_0386 hypothetical protein.
 
     0.541
Ppha_1743
PFAM: protein of unknown function DUF1130; KEGG: cyb:CYB_0385 hypothetical protein.
 
     0.522
Ppha_1909
KEGG: pna:Pnap_3261 hypothetical protein.
  
     0.494
Ppha_0836
PFAM: plasmid stabilization system; KEGG: cch:Cag_0575 hypothetical protein.
  
     0.433
Ppha_1603
KEGG: cch:Cag_1049 hypothetical protein.
  
     0.432
Ppha_2119
KEGG: cch:Cag_1343 hypothetical protein.
  
     0.416
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.