Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
Ppha_1760KEGG: cph:Cpha266_0845 alkylhydroperoxidase like protein, AhpD family. (335 aa)    
Predicted Functional Partners:
Ppha_1464
KEGG: bxe:Bxe_C1257 hypothetical protein.
  
     0.570
Ppha_0052
PFAM: zinc finger SWIM domain protein; KEGG: cph:Cpha266_1236 zinc finger, SWIM domain protein.
  
     0.544
Ppha_2430
Putative signal transduction protein with Nacht domain; PFAM: restriction endonuclease; SMART: AAA ATPase; KEGG: cph:Cpha266_0840 ribosome assembly protein 4 (RSA4).
  
     0.480
Ppha_1758
KEGG: gsu:GSU0055 hypothetical protein.
       0.452
Ppha_1759
TIGRFAM: addiction module component, TIGR02574 family; PFAM: Putative addiction module component CHP02574 family protein; KEGG: cte:CT1476 hypothetical protein.
       0.452
Ppha_0758
PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_0017 transcriptional regulator, TetR family.
 
  
 0.438
Ppha_2758
TIGRFAM: C-20 methyltransferase BchU; PFAM: O-methyltransferase family 2; KEGG: cch:Cag_0115 CrtF-related protein.
  
     0.408
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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