STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_1959KEGG: dol:Dole_0644 hypothetical protein. (388 aa)    
Predicted Functional Partners:
Ppha_0904
ATPase; KEGG: cph:Cpha266_2115 ATPase.
  
     0.772
Ppha_0143
KEGG: cph:Cpha266_0774 hypothetical protein.
  
     0.658
Ppha_1958
Hypothetical protein.
       0.543
Ppha_0889
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: gur:Gura_2922 putative transcriptional regulator.
  
     0.485
Ppha_1428
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: lpn:lpg2559 ATP-dependent DNA helicase.
  
     0.462
Ppha_2557
PFAM: ATPase; KEGG: rms:RMA_0723 archaeal ATPase family protein.
  
     0.451
Ppha_1960
KEGG: cte:CT1002 hypothetical protein.
       0.449
Ppha_1961
KEGG: cph:Cpha266_1572 hypothetical protein.
       0.449
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.