STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_1996PFAM: TOBE domain protein; KEGG: cph:Cpha266_0439 TOBE domain protein. (143 aa)    
Predicted Functional Partners:
Ppha_1995
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_0438 ABC transporter related.
 
  
 0.944
Ppha_1992
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sat:SYN_01058 TonB dependent receptor family.
 
     0.552
moaC
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
   
 
 0.534
Ppha_1331
Molybdopterin-guanine dinucleotide biosynthesis protein B; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
 
   
 0.525
Ppha_1998
TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: cph:Cpha266_0441 molybdenum ABC transporter, periplasmic molybdate-binding protein.
 
  
 0.513
Ppha_1999
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cph:Cpha266_0442 transcriptional regulator, Fis family.
 
  
 0.485
Ppha_0475
TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: cph:Cpha266_0454 molybdenum ABC transporter, periplasmic molybdate-binding protein.
 
  
 0.417
Ppha_1986
Transcriptional regulator, ModE family; TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein LysR; TOBE domain protein; KEGG: cph:Cpha266_0735 transcriptional regulator, ModE family.
 
 
   0.412
Ppha_0474
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.405
Ppha_1993
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_0446 ABC transporter related.
       0.405
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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