STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_2034KEGG: mar:MAE_40420 hypothetical protein. (134 aa)    
Predicted Functional Partners:
Ppha_2033
Hypothetical protein.
       0.789
Ppha_0634
PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cph:Cpha266_1844 hypothetical protein.
  
     0.690
Ppha_0161
PFAM: protein of unknown function UPF0175; KEGG: cph:Cpha266_0647 hypothetical protein.
  
     0.625
Ppha_1883
KEGG: sus:Acid_1151 hypothetical protein.
  
     0.576
Ppha_2825
KEGG: mar:MAE_46960 hypothetical protein.
  
     0.574
Ppha_2035
PFAM: Protein of unkown function DUF1819 putative inner membrane; KEGG: swo:Swol_0988 hypothetical protein.
       0.547
Ppha_2036
KEGG: swo:Swol_0989 hypothetical protein.
       0.547
Ppha_2037
KEGG: swo:Swol_0990 hypothetical protein.
       0.532
Ppha_2038
KEGG: swo:Swol_0997 hypothetical protein.
       0.493
Ppha_2824
KEGG: mar:MAE_61600 predicted nucleic acid-binding protein.
  
     0.490
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.