Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_2061PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: cch:Cag_1339 putative sugar transport protein. (526 aa)    
Predicted Functional Partners:
Ppha_0627
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: cph:Cpha266_0514 major facilitator superfamily MFS_1.
  
     0.691
Ppha_2062
KEGG: cch:Cag_1340 hypothetical protein.
       0.686
Ppha_2060
PFAM: UspA domain protein; KEGG: cph:Cpha266_0713 UspA domain protein.
     
 0.554
uvrC
Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.469
Ppha_1385
KEGG: cph:Cpha266_1319 phosphate-binding protein, putative.
  
     0.451
Ppha_0730
KEGG: cph:Cpha266_0604 hypothetical protein.
  
 
   0.400
Ppha_0731
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: cph:Cpha266_0605 biopolymer transport protein ExbD/TolR.
  
 
   0.400
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.