STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_2074PFAM: cytochrome c oxidase subunit I; KEGG: cch:Cag_1356 cytochrome-cbb3 oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family. (463 aa)    
Predicted Functional Partners:
Ppha_2075
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: cch:Cag_1357 cytochrome-c oxidase FixO chain.
 0.999
Ppha_2077
PFAM: cytochrome c class I; KEGG: cch:Cag_1358 probable cb-type cytochrome c oxidase subunit III.
 
 0.997
Ppha_2078
KEGG: cch:Cag_1359 polyferredoxin-like.
 
  
 0.918
Ppha_2080
KEGG: cch:Cag_1368 hypothetical protein.
 
 
 0.906
Ppha_2083
KEGG: cch:Cag_1371 hypothetical protein.
 
   
 0.894
Ppha_0467
PFAM: Cytochrome b/b6 domain; KEGG: cph:Cpha266_0430 cytochrome b/b6, N-terminal domain.
  
 
 0.881
Ppha_0466
Plastoquinol--plastocyanin reductase; PFAM: Rieske [2Fe-2S] domain protein; Cytochrome b6-f complex Fe-S subunit; KEGG: cph:Cpha266_0429 Plastoquinol--plastocyanin reductase.
  
 
 0.880
Ppha_2079
KEGG: cch:Cag_1367 hypothetical protein.
  
 
 0.859
Ppha_0811
KEGG: cch:Cag_1922 sulfur oxidation protein SoxX.
  
 
 0.818
Ppha_2082
TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: cch:Cag_1370 cytochrome oxidase maturation protein cbb3-type.
 
   
 0.785
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.