STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_2097PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_0919 alpha/beta hydrolase fold. (324 aa)    
Predicted Functional Partners:
Ppha_2642
PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_0302 alpha/beta hydrolase fold.
  
     0.747
Ppha_0829
PFAM: alpha/beta hydrolase fold; KEGG: cch:Cag_1299 dihydrolipoamide acetyltransferase, putative.
  
     0.743
Ppha_2549
PFAM: alpha/beta hydrolase fold; KEGG: cch:Cag_1627 3-oxoadipate enol-lactonase, putative.
  
     0.670
Ppha_2736
KEGG: cph:Cpha266_0185 alpha/beta hydrolase fold.
  
     0.640
Ppha_2098
PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: plt:Plut_0668 glutathione-regulated potassium-efflux system protein KefC, putative; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
     0.598
Ppha_1095
PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_2528 alpha/beta hydrolase fold.
  
     0.591
Ppha_1158
PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_1410 alpha/beta hydrolase fold.
  
     0.524
Ppha_2149
PFAM: ferredoxin; KEGG: pvi:Cvib_1151 ferredoxin.
  
  
 0.435
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.