STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Ppha_2103TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: cph:Cpha266_0913 sulfate transporter. (568 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
 
 0.723
Ppha_0467
PFAM: Cytochrome b/b6 domain; KEGG: cph:Cpha266_0430 cytochrome b/b6, N-terminal domain.
    
 
 0.698
Ppha_0785
PFAM: metallophosphoesterase; KEGG: plt:Plut_0506 Ser/Thr protein phosphatase family protein.
   
   0.608
Ppha_1460
PFAM: metallophosphoesterase; KEGG: cch:Cag_1093 putative exonuclease.
   
   0.608
Ppha_0575
KEGG: pat:Patl_3073 hypothetical protein.
    
 
 0.588
Ppha_2102
TIGRFAM: yecA family protein; KEGG: cph:Cpha266_0914 YecA family protein.
 
     0.588
Ppha_1864
KEGG: cph:Cpha266_0970 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
  
 
 0.572
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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