Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_2332KEGG: cph:Cpha266_1999 hypothetical protein. (169 aa)    
Predicted Functional Partners:
Ppha_2333
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cph:Cpha266_2000 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.761
Ppha_0333
KEGG: cch:Cag_0197 hypothetical protein.
  
     0.752
Ppha_0329
KEGG: cch:Cag_1809 hypothetical protein.
  
     0.683
Ppha_2334
PFAM: ribulose bisphosphate carboxylase large chain; KEGG: plt:Plut_0412 ribulose-bisphosphate carboxylase; Belongs to the RuBisCO large chain family.
       0.677
Ppha_0260
KEGG: cch:Cag_1857 hypothetical protein.
  
     0.671
Ppha_1533
PFAM: PASTA domain containing protein; KEGG: cph:Cpha266_0989 PASTA domain containing protein.
  
     0.633
Ppha_1901
PFAM: permease YjgP/YjgQ family protein; KEGG: pvi:Cvib_1109 permease YjgP/YjgQ family protein.
  
     0.610
Ppha_2331
KEGG: plt:Plut_0415 hypothetical protein.
       0.581
Ppha_2085
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
     0.528
Ppha_0828
KEGG: cph:Cpha266_1942 hypothetical protein.
  
     0.514
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.