STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_2480KEGG: fps:FP1907 hypothetical protein. (470 aa)    
Predicted Functional Partners:
Ppha_2479
PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: fps:FP1906 probable sugar O-acetyltransferase precursor; Belongs to the membrane-bound acyltransferase family.
 
    0.940
Ppha_2478
KEGG: fps:FP1905 hypothetical protein.
 
     0.901
Ppha_2477
KEGG: mxa:MXAN_0010 CapA family protein.
 
   
 0.680
Ppha_2481
KEGG: cph:Cpha266_2147 hypothetical protein.
       0.519
Ppha_1112
PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; KEGG: fps:FP1904 putative muramidase.
 
     0.506
Ppha_0946
KEGG: pvi:Cvib_1249 hypothetical protein.
  
     0.419
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.