STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_2589PFAM: glycosyl transferase group 1; KEGG: pme:NATL1_21041 hypothetical protein. (546 aa)    
Predicted Functional Partners:
Ppha_2586
TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: plasmid stabilization system; Addiction module toxin Txe/YoeB; KEGG: plt:Plut_1930 addiction module toxin, Txe/YoeB.
       0.686
Ppha_2587
KEGG: cch:Cag_0601 hypothetical protein.
       0.686
Ppha_2588
Hypothetical protein.
       0.686
Ppha_2590
PFAM: acyltransferase 3; KEGG: sde:Sde_0174 acyltransferase-like.
     
 0.592
Ppha_2591
PFAM: glycosyl transferase group 1; KEGG: cch:Cag_0447 hypothetical protein.
 
     0.485
Ppha_2592
PFAM: Methyltransferase type 11; KEGG: cch:Cag_1750 hypothetical protein.
 
     0.411
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.