Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ppha_2599PFAM: glycosyl transferase group 1; KEGG: cch:Cag_1481 glycosyltransferase-like. (956 aa)    
Predicted Functional Partners:
Ppha_2600
PFAM: glycosyl transferase family 2; KEGG: cch:Cag_1479 glycosyltransferase involved in cell wall biogenesis-like.
 
    0.813
Ppha_0256
PFAM: glycosyl transferase family 2; KEGG: plt:Plut_0169 glycosyl transferase.
 
    0.683
Ppha_1013
PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_1825 glycosyl transferase, family 2.
 
    0.620
Ppha_2598
PFAM: glycosyl transferase group 1; KEGG: hau:Haur_1032 glycosyl transferase group 1.
 
     0.531
Ppha_2597
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dvl:Dvul_2392 NAD-dependent epimerase/dehydratase.
  
    0.426
Ppha_1008
PFAM: polysaccharide biosynthesis protein; KEGG: cph:Cpha266_0889 polysaccharide biosynthesis protein.
 
  
 0.414
Ppha_2093
PFAM: Nucleotidyl transferase; KEGG: plt:Plut_0673 glucose-1-phosphate thymidylyltransferase.
 
  
 0.408
Ppha_2299
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.406
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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