STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_2619KEGG: cph:Cpha266_0316 hypothetical protein. (333 aa)    
Predicted Functional Partners:
Ppha_2161
PFAM: WD40 domain protein beta Propeller; KEGG: pvi:Cvib_1164 WD40 domain protein beta propeller.
    
 
 0.591
Ppha_1094
PFAM: major facilitator superfamily MFS_1; KEGG: cch:Cag_0889 transporter, putative.
  
   
 0.575
Ppha_1262
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cch:Cag_1014 TonB-dependent receptor-related protein.
    
 
 0.531
Ppha_1963
KEGG: pvi:Cvib_0760 cytochrome c family protein.
  
    0.513
Ppha_1069
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: bth:BT_2774 putative adenylate cyclase.
   
 
 0.511
Ppha_2501
KEGG: cph:Cpha266_0524 hypothetical protein.
  
     0.506
Ppha_1964
PFAM: cytochrome B561; KEGG: plt:Plut_1198 hydrogenase, b-type cytochrome subunit, putative.
  
     0.476
Ppha_2540
PFAM: FAD dependent oxidoreductase; KEGG: cph:Cpha266_2269 FAD dependent oxidoreductase.
 
     0.460
Ppha_2620
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: cph:Cpha266_0314 ferric uptake regulator, Fur family; Belongs to the Fur family.
       0.458
Ppha_1782
Protease Do; KEGG: cch:Cag_0494 peptidase S1C, Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein.
    
 
 0.452
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.