STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_2627Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. (483 aa)    
Predicted Functional Partners:
Ppha_0648
KEGG: cch:Cag_0172 hypothetical protein.
   
 0.968
Ppha_1046
PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: stm:STM3529 glycerol dehydrogenase.
     
 0.927
plsY
Protein of unknown function DUF205; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
    
 0.915
Ppha_0210
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cph:Cpha266_2470 glycerophosphoryl diester phosphodiesterase.
 
  
 0.766
Ppha_1069
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: bth:BT_2774 putative adenylate cyclase.
   
 0.748
Ppha_2626
KEGG: cte:CT0186 hypothetical protein.
       0.718
Ppha_1782
Protease Do; KEGG: cch:Cag_0494 peptidase S1C, Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein.
   
 0.710
Ppha_1393
PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: cph:Cpha266_1306 ATP citrate lyase subunit 2.
   
 
 0.706
Ppha_1233
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: cph:Cpha266_2260 AAA ATPase, central domain protein.
   
  0.636
Ppha_1810
KEGG: plt:Plut_0697 AAA ATPase, CDC48; TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: AAA ATPase VAT domain protein; AAA ATPase central domain protein; cell division protein 48 CDC48 domain 2; SMART: AAA ATPase; Belongs to the AAA ATPase family.
   
  0.636
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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