Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ppha_2642PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_0302 alpha/beta hydrolase fold. (296 aa)    
Predicted Functional Partners:
Ppha_0829
PFAM: alpha/beta hydrolase fold; KEGG: cch:Cag_1299 dihydrolipoamide acetyltransferase, putative.
  
     0.751
Ppha_2097
PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_0919 alpha/beta hydrolase fold.
  
     0.747
Ppha_2549
PFAM: alpha/beta hydrolase fold; KEGG: cch:Cag_1627 3-oxoadipate enol-lactonase, putative.
  
     0.624
Ppha_1158
PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_1410 alpha/beta hydrolase fold.
  
     0.590
Ppha_1876
PFAM: ferrochelatase; KEGG: cph:Cpha266_0958 ferrochelatase; Belongs to the ferrochelatase family.
  
     0.565
Ppha_1095
PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_2528 alpha/beta hydrolase fold.
  
     0.559
Ppha_2643
TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: cch:Cag_0590 penicillin-binding protein 1A.
       0.539
Ppha_2641
PFAM: SNARE associated Golgi protein; KEGG: cph:Cpha266_0303 DedA protein.
       0.512
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
   
   0.494
Ppha_0482
KEGG: cph:Cpha266_0474 hypothetical protein.
  
  
 0.484
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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