Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ppha_2725PFAM: protein of unknown function DUF156; KEGG: pvi:Cvib_1645 hypothetical protein. (76 aa)    
Predicted Functional Partners:
Ppha_2724
PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_0183 outer membrane efflux protein.
       0.781
Ppha_2723
KEGG: plt:Plut_2000 hypothetical protein.
  
    0.762
Ppha_1536
PFAM: putative esterase; KEGG: pvi:Cvib_0975 putative esterase.
  
  
 0.695
Ppha_2722
PFAM: acriflavin resistance protein; KEGG: cph:Cpha266_0181 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.686
Ppha_2721
KEGG: cph:Cpha266_0180 hypothetical protein.
       0.667
Ppha_2720
PFAM: beta-lactamase domain protein; KEGG: cph:Cpha266_0179 beta-lactamase domain protein; Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.
     
 0.660
Ppha_2719
Hypothetical protein.
       0.554
Ppha_2718
Putative signal-transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: cch:Cag_0126 CBS.
       0.537
Ppha_2420
PFAM: Heavy metal transport/detoxification protein; KEGG: cph:Cpha266_2086 heavy metal transport/detoxification protein.
 
  
 0.501
Ppha_2726
KEGG: cch:Cag_0120 hypothetical protein.
       0.489
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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