Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_2759KEGG: plt:Plut_2005 chlorosome envelope protein B. (75 aa)    
Predicted Functional Partners:
Ppha_2760
PFAM: aminoglycoside phosphotransferase; KEGG: cph:Cpha266_0203 aminoglycoside phosphotransferase.
       0.545
Ppha_2761
PFAM: Nucleotidyl transferase; KEGG: cch:Cag_0193 mannose-1-phosphate guanylyltransferase, putative.
       0.545
Ppha_2762
PFAM: conserved hypothetical protein; KEGG: cch:Cag_0194 hypothetical protein.
       0.545
Ppha_2758
TIGRFAM: C-20 methyltransferase BchU; PFAM: O-methyltransferase family 2; KEGG: cch:Cag_0115 CrtF-related protein.
       0.422
Ppha_2763
PFAM: Na+/solute symporter; KEGG: cph:Cpha266_0206 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.415
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.