Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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co-expression
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[Homology]
Score
vapC-3PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (134 aa)    
Predicted Functional Partners:
Ppha_2778
PFAM: SpoVT/AbrB domain protein; KEGG: cch:Cag_1324 hypothetical protein.
 
 
 0.965
Ppha_0152
KEGG: rpd:RPD_2062 SpoVT/AbrB-like.
 
 
 0.844
Ppha_1096
KEGG: cph:Cpha266_0092 virulence associated protein B.
 
 
 0.844
Ppha_1048
PFAM: PilT protein domain protein; KEGG: cch:Cag_1777 PIN (PilT N terminus) domain.
  
     0.751
mnmE
tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
       0.566
Ppha_0145
KEGG: cph:Cpha266_1216 hypothetical protein.
 
 
   0.465
Ppha_2780
TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: cph:Cpha266_0151 nucleoside triphosphate pyrophosphohydrolase.
       0.402
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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