STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_2859TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: cph:Cpha266_0466 arsenical-resistance protein. (352 aa)    
Predicted Functional Partners:
Ppha_2860
SMART: Rhodanese domain protein; KEGG: cph:Cpha266_0463 rhodanese domain protein.
     
 0.776
Ppha_2863
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: cph:Cpha266_0918 protein tyrosine phosphatase.
  
  
 0.752
Ppha_2861
Hypothetical protein.
       0.727
Ppha_2862
Hypothetical protein.
       0.712
Ppha_2858
PFAM: beta-lactamase domain protein; KEGG: pde:Pden_4160 SoxH protein-like.
       0.586
Ppha_2864
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
       0.526
Ppha_1473
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: cch:Cag_0397 protein tyrosine phosphatase.
  
  
 0.482
Ppha_2857
PFAM: protein of unknown function DUF89; KEGG: cph:Cpha266_1577 protein of unknown function DUF89.
       0.411
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.