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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102790457Developmentally regulated GTP binding protein 1. (366 aa)    
Predicted Functional Partners:
LOC102800234
Zinc finger CCCH-type containing 15.
   
 
 0.998
LOC102786622
RWD domain containing 1.
   
 
 0.974
LOC102782025
Ribosomal protein L8.
   
 
 0.945
LOC102776933
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 
 0.944
LOC102795110
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.942
LOC102794729
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
   0.942
LOC102799242
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
 
 0.931
ENSNBRP00000007540
Citrate synthase; Belongs to the citrate synthase family.
    
   0.928
LOC102791273
Zgc:193812.
    
   0.928
RELL1
RELT like 1.
   
 
 0.926
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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