STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102799143Carn_acyltransf domain-containing protein. (614 aa)    
Predicted Functional Partners:
LOC102775666
Ribonuclease P/MRP 14 subunit.
   
 0.861
LOC102788601
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.843
LOC102787954
Sterol carrier protein 2b.
   
 0.843
LOC102790414
Hydroxysteroid dehydrogenase like 2.
   
 0.801
LOC102787649
Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family.
  
0.783
LOC102781447
Carnitine O-acetyltransferase b.
  
  
 
0.779
LOC102781795
Zgc:154046; Belongs to the carnitine/choline acetyltransferase family.
  
  
 
0.774
LOC102777445
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.765
LOC102798006
Peroxisomal biogenesis factor 14.
    
 0.746
LOC102799745
Malate synthase-like.
   
  
 0.744
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.