STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102792479ADP-ribosylation factor-like 13b. (371 aa)    
Predicted Functional Partners:
LOC102792809
Inositol polyphosphate-5-phosphatase E.
     
 0.952
LOC102794275
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...]
     
 0.946
LOC102788602
Intraflagellar transport 46 homolog (Chlamydomonas).
    
 
 0.870
LOC102797066
Intraflagellar transport 88 homolog.
    
 0.865
ENSNBRP00000029681
Uncharacterized protein.
   
 0.854
LOC102787459
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 
 0.839
LOC102796367
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.816
LOC102794061
Intraflagellar transport 81 homolog.
    
 
 0.811
LOC102789626
Intraflagellar transport 74.
    
 0.800
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.793
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.