STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D13TBC1 domain family member 13. (400 aa)    
Predicted Functional Partners:
ENSNBRP00000011479
Si:dkey-16l2.16.
     
 0.760
LOC102798355
RAB35, member RAS oncogene family b.
     
 0.760
LOC102779695
NCK interacting protein with SH3 domain.
   
    0.751
LOC102778458
Intraflagellar transport 27.
     
 0.720
ENSNBRP00000009949
SPOUT domain containing methyltransferase 1.
      
 0.561
LOC102795103
TBC1 domain family, member 7.
      
 0.536
LOC102778129
TBC1 domain family, member 23.
      
 0.495
LOC102788598
Peroxisomal biogenesis factor 6.
   
  
 0.460
LOC102792280
Dolichol kinase.
      
 0.445
ENSNBRP00000001177
Uncharacterized protein.
      
 0.443
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.