STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102779470Uncharacterized protein. (3029 aa)    
Predicted Functional Partners:
LOC102800272
Four-jointed box kinase 1.
   
 0.795
LOC102783231
Catenin (cadherin-associated protein), beta 1.
    
 0.663
LOC102791214
Uncharacterized protein.
    
 0.662
LOC102797026
Uncharacterized protein.
    
 0.662
LOC102789496
Junction plakoglobin a.
    
 0.662
LOC102780475
Uncharacterized protein.
   
0.648
ENSNBRP00000023440
Si:dkeyp-86d6.2.
   
 0.648
LOC102783075
Protocadherin-related 15a.
   
0.648
LOC102779947
FAT atypical cadherin 1a.
   
0.644
LOC102782654
FAT atypical cadherin 2.
   
0.644
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.