STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102800155Uncharacterized protein; Belongs to the synuclein family. (117 aa)    
Predicted Functional Partners:
LOC102776074
Parkin RBR E3 ubiquitin protein ligase.
    
 0.989
ENSNBRP00000019202
Uncharacterized protein.
    
 0.980
LOC102780689
Tyrosine hydroxylase.
    
 0.929
LOC102780353
Tyrosine hydroxylase 2.
    
 0.929
LOC102775856
Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.
    
 0.909
LOC102780946
Heat shock protein 4a.
   
 0.909
LOC102791072
Heat shock protein 4b.
   
 0.909
LOC102778483
Apolipoprotein Eb.
    
 0.907
LOC102800146
NADH:ubiquinone oxidoreductase subunit B.
    
 0.889
LOC102786645
Proteasome 26S subunit, ATPase 4.
    
 0.889
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.