STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102796479ATP-binding cassette, sub-family G (WHITE), member 2c. (609 aa)    
Predicted Functional Partners:
LOC102778191
ATP-binding cassette, sub-family G (WHITE), member 5.
   
0.922
ENSNBRP00000028482
Uncharacterized protein.
  
 0.832
LOC102775673
ATP-binding cassette, sub-family G (WHITE), member 2a.
  
  
 
0.819
LOC102784225
ATP-binding cassette, sub-family G (WHITE), member 2d.
  
  
 
0.819
LOC102786245
Cytochrome c oxidase assembly homolog 15 (yeast).
    
 0.673
LOC102777911
Uncharacterized protein.
   
 0.663
LOC102778205
Uncharacterized protein.
   
 0.663
LOC102792729
TIP41, TOR signaling pathway regulator-like (S. cerevisiae).
     
 0.645
LOC102791746
ATP synthase subunit gamma.
  
   0.645
LOC102797986
Immunoglobulin (CD79A) binding protein 1.
    
 0.636
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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