STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102786577Transmembrane anterior posterior transformation 1a. (533 aa)    
Predicted Functional Partners:
ENSNBRP00000031272
Uncharacterized protein.
    
   0.836
ENSNBRP00000001958
Si:ch211-11n16.2.
   
    0.545
ZFYVE1
Uncharacterized protein.
   
    0.545
LOC102778719
Zinc finger, FYVE domain containing 1.
   
    0.545
ENSNBRP00000007685
Transformer 2 alpha homolog.
   
 
  0.520
LOC102799508
Transformer 2 beta homolog.
   
 
  0.520
LOC102780327
RRM domain-containing protein.
   
 
  0.520
LOC102790458
Uncharacterized protein.
      
 0.461
LOC102796609
Uncharacterized protein.
   
  
 0.444
LOC102785650
HAUS augmin-like complex, subunit 3.
      
 0.414
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.