STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102796274Uncharacterized protein. (581 aa)    
Predicted Functional Partners:
LOC102799495
BH4_2 domain-containing protein.
   
 0.762
ENSNBRP00000018573
BCL2 apoptosis regulator b.
   
 0.762
LOC102796384
Uncharacterized protein.
    
0.728
LOC102786191
Retinoid X receptor, alpha a.
    
0.728
LOC102775931
Retinoid x receptor, beta b.
    
0.728
RXRB
Uncharacterized protein.
    
0.728
LOC102791265
Nuclear receptor corepressor 2.
    
 0.724
LOC102780433
Nuclear receptor corepressor 1.
    
 0.724
ENSNBRP00000004306
NR LBD domain-containing protein.
    
 0.677
LOC102787043
Nuclear receptor subfamily 1, group D, member 2b.
    
0.677
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.