STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102777820EI24 autophagy associated transmembrane protein. (332 aa)    
Predicted Functional Partners:
LOC102782112
Crystallin, zeta (quinone reductase).
     
 0.841
TP53I3
Tumor protein p53 inducible protein 3.
     
 0.841
LOC102796027
Ectopic P-granules autophagy protein 5 homolog (C. elegans).
      
 0.572
LOC102781817
Tetratricopeptide repeat domain 37.
      
 0.556
ENSNBRP00000001912
Uncharacterized protein.
      
 0.470
LOC102797662
GTPase activating Rap/RanGAP domain like 3.
      
 0.470
LOC102797900
Carnosine N-methyltransferase 1.
      
 0.470
LOC102794727
Vacuole membrane protein 1.
      
 0.467
LOC102799116
Vacuole membrane protein 1.
      
 0.467
LOC102782385
Tumor protein p53 binding protein, 1.
      
 0.447
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.