Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Sbal_0807PFAM: Phosphoglycerate mutase; KEGG: son:SO0749 hypothetical protein. (205 aa)    
Predicted Functional Partners:
Sbal_0806
PFAM: ferredoxin-dependent glutamate synthase; KEGG: shm:Shewmr7_0600 ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family.
     
 0.773
Sbal_0538
KEGG: son:SO0578 hypothetical protein.
 
     0.703
Sbal_0702
PFAM: protein of unknown function DUF819; KEGG: shn:Shewana3_0774 protein of unknown function DUF819.
  
     0.692
Sbal_0015
PFAM: amidohydrolase; KEGG: shn:Shewana3_0019 amidohydrolase.
 
     0.689
Sbal_0016
PFAM: WD40 domain protein beta Propeller; KEGG: she:Shewmr4_0011 amidohydrolase.
 
     0.640
cobQ
Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
  
  
 0.614
Sbal_2851
PFAM: amidohydrolase; KEGG: shn:Shewana3_1403 amidohydrolase.
  
     0.591
Sbal_4077
KEGG: shm:Shewmr7_0292 hypothetical protein.
  
     0.585
Sbal_0854
KEGG: sdn:Sden_0345 PepSY-associated TM helix.
 
     0.581
Sbal_0853
PFAM: PepSY-associated TM helix domain protein; KEGG: sfr:Sfri_0270 hypothetical protein.
 
    0.550
Your Current Organism:
Shewanella baltica
NCBI taxonomy Id: 325240
Other names: S. baltica OS155, Shewanella baltica OS155, Shewanella baltica str. OS155, Shewanella baltica strain OS155
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