STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sbal_2498PFAM: Ig domain protein, group 1 domain protein; KEGG: sfr:Sfri_2480 Ig domain protein, group 1 domain protein. (835 aa)    
Predicted Functional Partners:
Sbal_2779
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Proprotein convertase, P; protease-associated PA domain protein; peptidase domain protein; proteinase inhibitor I9, subtilisin propeptide; KEGG: shn:Shewana3_1443 peptidase S8 and S53, subtilisin, kexin, sedolisin.
  
 
 0.832
Sbal_2156
DNA translocase FtsK; PFAM: cell divisionFtsK/SpoIIIE; KEGG: shm:Shewmr7_2013 cell divisionFtsK/SpoIIIE.
    
 
 0.776
Sbal_3752
PFAM: porin, Gram-negative type; KEGG: sfr:Sfri_0677 porin, gram-negative type.
  
    0.650
Sbal_2743
KEGG: shm:Shewmr7_1490 hypothetical protein.
    
 
 0.608
Sbal_1425
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; KR; KEGG: she:Shewmr4_2666 beta-ketoacyl synthase.
  
 
 0.605
Sbal_2769
KEGG: shn:Shewana3_1452 conserved hypothetical protein.
  
 
   0.564
Sbal_3523
KEGG: she:Shewmr4_0693 hypothetical protein.
  
     0.557
Sbal_3843
KEGG: shm:Shewmr7_0458 hypothetical protein.
    
 
 0.541
Sbal_1075
PFAM: TonB-dependent receptor; KEGG: son:SO3514 hypothetical TonB-dependent receptor.
  
 
   0.540
Sbal_2288
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: she:Shewmr4_2134 TonB-dependent receptor.
  
 
   0.531
Your Current Organism:
Shewanella baltica
NCBI taxonomy Id: 325240
Other names: S. baltica OS155, Shewanella baltica OS155, Shewanella baltica str. OS155, Shewanella baltica strain OS155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.