Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Sbal_3205PFAM: nucleoside recognition domain protein; KEGG: shn:Shewana3_1062 nucleoside recognition domain protein. (452 aa)    
Predicted Functional Partners:
Sbal_2454
PFAM: nucleoside recognition domain protein; KEGG: she:Shewmr4_1666 nucleoside recognition domain protein.
  
  
 0.870
Sbal_1737
Na+/H+ antiporter NhaC; PFAM: Gluconate transporter; Citrate transporter; Na+/H+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: shn:Shewana3_2542 Na+/H+ antiporter NhaC.
 
     0.686
Sbal_2845
PFAM: Na+/H+ antiporter NhaC; KEGG: shm:Shewmr7_1419 Na+/H+ antiporter NhaC.
  
     0.625
Sbal_4057
PFAM: Citrate transporter; Na+/H+ antiporter NhaC; KEGG: shm:Shewmr7_0305 Na+/H+ antiporter NhaC.
  
     0.565
Sbal_1246
PFAM: chemotaxis sensory transducer; KEGG: shn:Shewana3_1156 methyl-accepting chemotaxis sensory transducer.
 
      0.531
Sbal_2234
PFAM: Na+/H+ antiporter NhaC; KEGG: shm:Shewmr7_1936 Na+/H+ antiporter NhaC.
  
     0.420
Your Current Organism:
Shewanella baltica
NCBI taxonomy Id: 325240
Other names: S. baltica OS155, Shewanella baltica OS155, Shewanella baltica str. OS155, Shewanella baltica strain OS155
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