STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sbal_4231PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: shn:Shewana3_0123 multiple antibiotic resistance (MarC)-related proteins. (197 aa)    
Predicted Functional Partners:
Sbal_0547
PFAM: MscS Mechanosensitive ion channel; KEGG: shm:Shewmr7_3443 MscS mechanosensitive ion channel.
  
    0.538
Sbal_4232
KEGG: shm:Shewmr7_0117 hypothetical protein.
       0.479
Sbal_4230
PFAM: PKD domain containing protein; peptidase M6, immune inhibitor A; KEGG: shn:Shewana3_0124 peptidase M6, immune inhibitor A.
       0.402
Your Current Organism:
Shewanella baltica
NCBI taxonomy Id: 325240
Other names: S. baltica OS155, Shewanella baltica OS155, Shewanella baltica str. OS155, Shewanella baltica strain OS155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.