STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBI17_007081AB hydrolase-1 domain-containing protein. (310 aa)    
Predicted Functional Partners:
BBI17_004907
Uncharacterized protein.
    
 0.756
BBI17_003803
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.718
BBI17_000474
Uncharacterized protein; Belongs to the TrpA family.
    
 0.654
BBI17_002643
PALP domain-containing protein.
    
 0.654
BBI17_000051
PDZ domain-containing protein.
    
  0.632
BBI17_005050
Uncharacterized protein.
    
  0.632
BBO99_00004754
Uncharacterized protein.
    
  0.632
BBI17_002038
Uncharacterized protein.
    
  0.632
BBI17_003081
Uncharacterized protein.
   
 0.609
BBI17_001735
Uncharacterized protein.
   
 0.587
Your Current Organism:
Phytophthora kernoviae
NCBI taxonomy Id: 325452
Other names: IMI:393170, P. kernoviae, Phytophthora kernoviae Brasier, Beales & S.A. Kirk, 2005
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.