STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBI17_003773WD_REPEATS_REGION domain-containing protein. (883 aa)    
Predicted Functional Partners:
BBI17_008874
Uncharacterized protein.
   
0.932
BBI17_002727
BP28CT domain-containing protein.
   
 0.932
BBI17_004259
Uncharacterized protein.
   
 0.932
BBI17_006864
Uncharacterized protein.
   
 0.932
BBI17_000127
WD_REPEATS_REGION domain-containing protein.
   
 0.932
BBI17_004746
Uncharacterized protein.
   
0.931
BBI17_002681
Uncharacterized protein.
   
 0.931
BBI17_006405
WD_REPEATS_REGION domain-containing protein.
   
 0.931
BBI17_002809
WD_REPEATS_REGION domain-containing protein.
   
 0.929
BBI17_000628
WD_REPEATS_REGION domain-containing protein.
   
0.928
Your Current Organism:
Phytophthora kernoviae
NCBI taxonomy Id: 325452
Other names: IMI:393170, P. kernoviae, Phytophthora kernoviae Brasier, Beales & S.A. Kirk, 2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.