STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBI17_006362Protein kinase domain-containing protein. (270 aa)    
Predicted Functional Partners:
BBI17_002415
Uncharacterized protein.
   
 0.904
BBO99_00009220
SMC hinge domain-containing protein.
   
 0.879
BBI17_008780
Uncharacterized protein.
    
 0.850
BBI17_000053
Protein kinase domain-containing protein.
  
 0.835
BBO99_00002295
Rad21_Rec8_N domain-containing protein.
   
 0.832
BBO99_00003682
Uncharacterized protein.
   
 0.824
BBI17_004390
BUB1 N-terminal domain-containing protein.
   
 0.821
BBO99_00001166
Uncharacterized protein.
  
0.818
BBI17_004851
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
0.810
BBI17_005959
Protein kinase domain-containing protein.
  
0.809
Your Current Organism:
Phytophthora kernoviae
NCBI taxonomy Id: 325452
Other names: IMI:393170, P. kernoviae, Phytophthora kernoviae Brasier, Beales & S.A. Kirk, 2005
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