STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBO99_00009833Uncharacterized protein. (186 aa)    
Predicted Functional Partners:
BBI17_005844
HTH myb-type domain-containing protein.
    
 0.462
BBI17_007260
Uncharacterized protein.
   
   0.448
BBI17_002871
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
   0.441
BBI17_002897
ATP-synt_DE_N domain-containing protein.
    
   0.428
BBI17_009205
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
   0.414
BBI17_009326
ATP-synt_ab domain-containing protein.
    
   0.414
BBI17_009133
Uncharacterized protein.
   
   0.401
BBI17_003791
Uncharacterized protein.
    
   0.400
Your Current Organism:
Phytophthora kernoviae
NCBI taxonomy Id: 325452
Other names: IMI:393170, P. kernoviae, Phytophthora kernoviae Brasier, Beales & S.A. Kirk, 2005
Server load: low (22%) [HD]