STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBI17_000503Uncharacterized protein. (1388 aa)    
Predicted Functional Partners:
BBI17_003081
Uncharacterized protein.
    
 0.679
BBO99_00007745
ZZ-type domain-containing protein.
    
  0.676
BBI17_006284
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
  0.665
BBI17_001145
PPM-type phosphatase domain-containing protein.
   
 0.648
BBI17_008429
Uncharacterized protein.
   
 0.648
BBI17_004748
PPM-type phosphatase domain-containing protein.
   
 0.648
BBI17_003322
Uncharacterized protein.
    
 0.622
BBI17_003729
CHAT domain-containing protein.
    
 0.618
BBI17_005698
Uncharacterized protein.
    
  0.607
BBI17_003368
Phosphatidate cytidylyltransferase.
    
  0.607
Your Current Organism:
Phytophthora kernoviae
NCBI taxonomy Id: 325452
Other names: IMI:393170, P. kernoviae, Phytophthora kernoviae Brasier, Beales & S.A. Kirk, 2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.